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| Registros recuperados: 25 | |
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| Artois, T.J.; Schockaert, E.R.. |
| The taxonomy of the genus <i>Polycystis</i> Koelliker, 1845 <i>sensu</i> Schockaert & Karling, 1975 is discussed. Character analysis reveals the monophyletic state of the three species groups these authors defined within it. As no synapomorphies for the three groups can be found, the genus is split in three genera: <i>Polycystis</i> Koelliker, 1845, <i>Macrorhynchus</i> Graff, 1882 and <i>Paulodora Marcus</i>, 1948. The systematic position of <i>Macrorhynchus yaganus</i> (Marcus, 1954) Evdonin, 1977 is also discussed, resulting in the erection of the new genus <i>Marcusia</i> gen. n. |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Phylogenetics; Taxonomy; Eukalyptorhynchia; Plathelminthes; Polycystididae; Polycystis. |
| Ano: 1998 |
URL: http://www.vliz.be/nl/open-marien-archief?module=ref&refid=6815 |
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| Guillon, J.-M.; Guéry, L.; Hulin, V.; Girondot, M.. |
| Turtles (Testudines) form a monophyletic group with a highly distinctive body plan. The taxonomy and phylogeny of turtles are still under discussion, at least for some clades. Whereas in most previous studies, only a few species or genera were considered, we here use an extensive compilation of DNA sequences from nuclear and mitochondrial genes for more than two thirds of the total number of turtle species to infer a large phylogeny for this taxon. Our results enable us to discuss previous hypotheses on species phylogeny or taxonomy. We are thus able to discriminate between competing hypotheses and to suggest taxonomical modifications. Finally, we pinpoint the remaining ambiguities for this phylogeny and the species for which new sequences should be... |
| Tipo: Article / Letter to the editor |
Palavras-chave: MtDNA sequence; NuDNA sequence; Phylogenetics; Reptilia; Taxonomy; 42.82. |
| Ano: 2012 |
URL: http://www.repository.naturalis.nl/record/421559 |
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| Solari,Sergio. |
| As currently understood Monodelphis includes more than 22 species and is the most diverse genus of opossums (Didelphimorphia). No complete evaluation of the systematic relationships of its species has been attempted, despite the fact that several species groups and even genus-level groups have been proposed based on morphology, and that some of them are limited to recognized biogeographic regions. Here, genealogic relationships among 17 species were assessed based on phylogenetic analyses of 60 individual sequences (801 base pairs of the mitochondrial cytochrome b gene). The analyses cast doubts on the monophyly of Monodelphis, but species were consistently discriminated into eight species groups: (a) brevicaudata group, with five species, (b) adusta... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Didelphimorphia; Phylogenetics; Species limits; Taxonomy. |
| Ano: 2010 |
URL: http://www.scielo.org.ar/scielo.php?script=sci_arttext&pid=S0327-93832010000200007 |
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| Jong, Yde S.D.M. de; Hitipeuw, Creusa; Prud’homme van Reine, Willem F.. |
| A cladistic analysis, based on a taxonomic revision is carried out for 7 Acanthophora species using 19 characters. Hypotheses on species affinities are based primarily on morphological characters. Because most species show only few distinctive characters, emphasis was placed on features of spine development, either in relation to vegetative or to reproductive structures. Global distribution of 7 Acanthophora species: viz. A. aokii, A. dendroides, A. muscoides, A. nayadiformis, A. pacifica, A. ramulosa, and A. spicifera, shows a discontinuous pattern. Although widely distributed species are present (A. muscoides and A. spicifera), a disjunct distribution of other species occurs in the Pacific (A. aokii), Indian Ocean (A. dendroides), East-Atlantic region... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Rhodomelaceae; Rhodophyta; Biogeography; Phylogenetics; Seaweeds; Taxonomy. |
| Ano: 1999 |
URL: http://www.repository.naturalis.nl/record/525490 |
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| Chachá,Silvana Gama Florencio; Gomes-Gouvêa,Michele Soares; Malta,Fernanda de Mello; Ferreira,Sandro da Costa; Villanova,Márcia Guimarães; Souza,Fernanda Fernandes; Teixeira,Andreza Correa; Passos,Afonso Dinis da Costa; Pinho,João Renato Rebello; Martinelli,Ana de Lourdes Candolo. |
| Abstract Hepatitis B virus (HBV) is distributed worldwide, with geographical variations regarding prevalence of the different genotypes. The aim of this study was to determine the HBV genotypes and subgenotypes circulating in Southeast Brazil and compare the genetic sequences found with HBV sequences previously described in the world. Sequences from 166 chronic HBV carriers were analyzed using the fragment constituted by 1306 base pairs comprising surface and polymerase regions of the HBV genome. The sequences obtained were submitted to phylogenetic analysis. HBV subgenotypes A1, A2, D1-D4, F2a, and F4 were found. HBV genotype D was the most frequent, found in 99 patients (58.4%). Within this group, subgenotype D3 was the most prevalent, in 73 patients... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Hepatitis B virus; Genotype; Phylogenetics; Intra-familial transmission. |
| Ano: 2017 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702017000400424 |
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| Ceresini,Paulo C.; Costa-Souza,Elaine; Zala,Marcello; Furtado,Edson L.; Souza,Nilton L.. |
| The white-thread blight and black rot (WTBR) caused by basidiomycetous fungi of the genus Ceratobasidium is emerging as an important plant disease in Brazil, particularly for crop species in the Ericales such as persimmon (Diospyros kaki) and tea (Camellia sinensis). However, the species identity of the fungal pathogen associated with either of these hosts is still unclear. In this work, we used sequence variation in the internal transcribed spacer regions, including the 5.8S coding region of rDNA (ITS-5.8S rDNA), to determine the phylogenetic placement of the local white-thread-blight-associated populations of Ceratobasidium sp. from persimmon and tea, in relation to Ceratobasidium species already described world-wide. The two sister populations of... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Ecological speciation; Fungal plant pathogens; Host specialization; Population divergence; Phylogenetics. |
| Ano: 2012 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000300016 |
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| Hustad, V.P.; Miller, A.N.; Dentinger, B.T.M.; Cannon, P.F.. |
| The class Geoglossomycetes is a recently created class of Ascomycota, currently comprised of one family (Geoglossaceae) and five genera (Geoglossum, Nothomitra, Sarcoleotia, Thuemenidium and Trichoglossum). These fungi, commonly known as earth tongues, have long been a subject of mycological research. However, the taxonomy within the group has historically been hindered by the lack of reliable morphological characters, uncertain ecological associations, and the inability to grow these fungi in culture. The phylogenetic relationships of Geoglossomycetes were investigated by conducting maximum likelihood and Bayesian analyses using a 4-gene dataset (ITS, LSU, MCM7, RPB1). Five well-supported monophyletic clades were found that did not correspond exactly with... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Ascomycota; Earth tongues; Geoglossum; Microglossum; Phylogenetics; Systematics. |
| Ano: 2013 |
URL: http://www.repository.naturalis.nl/record/532273 |
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| Gielis, C.. |
| The genera of the superfamily Pterophoroidea are redescribed. Three new genera are described: Dejongia, Stockophorus and Shafferia. The characters of the genera and their states are translated into a data matrix. A majority rule consensus tree composed with PAUP serves as a basis for a phylogenetic analysis. A cladogram, representing the views of the author, based on the data acquired, is presented with argumentation. The evaluation of the characters is discussed. A new subfamily is erected, the Deuterocopinae. The Pterophorinae are redefined. The Platyptiliinae are synonymized with the Pterophorinae. The Macropiratidae, considered by Minet (1991) a subfamily or a genus of the Pterophoridae, has been raised to family rank, and is placed as the sister group... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Pterophoroidea; Pterophoridae; Macropiratidae; Revision; Phylogenetics; Biogeography; Checklist.; 42.75. |
| Ano: 1993 |
URL: http://www.repository.naturalis.nl/record/317793 |
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| Potkamp, G.; Vermeij, M.J.A.; Hoeksema, B.W.. |
| Snails of the genus Coralliophila (Muricidae: Coralliophilinae) are common corallivores in the Caribbean, feeding on a wide range of host species. In the present study, the morphological and genetic variation in C. galea and C. caribaea were studied in relation to their association with host coral species at Curaçao. Differences in shell shape among snails living on different hosts were quantified using geometric morphometric and phylogenetic relationships were studied using two mitochondrial markers (12S and COI). Based on these analyses, a new species, C. curacaoensis sp. nov., was found in association with the scleractinian coral Madracis auretenra. Both C. galea and C. caribaea showed host-specific differences in shell shape, size, and shell allometry... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Genetic differentiation; Phylogenetics; 12S; COI; Corallivory; Morphology; Geometric morphometrics; Host race. |
| Ano: 2017 |
URL: http://www.repository.naturalis.nl/record/630190 |
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| Ruiz Urquiola, A.. |
| El manejo efectivo para la conservación de las tortugas marinas depende del entendimiento de las interconexiones demográficas entre las poblaciones. En este trabajo se determinaron la estructura poblacional, la diversidad genética y las relaciones filogenéticas y filogeográficas entre las principales colonias de anidación cubanas de Chelonia mydas y Caretta caretta, y se compararon en un contexto regional, a partir de la secuenciación de la primera mitad de la región no codificadora del DNA mitocóndrico, con vistas a un manejo sostenible. En las colonias de anidación cubanas de ambas especies estuvieron presentes los haplotipos más distribuidos y representados de los linajes de cada especie informados para la región. No obstante, las colonias de... |
| Tipo: Theses and Dissertations |
Palavras-chave: Population genetics; Phylogenetics; Marine turtles. |
| Ano: 2008 |
URL: http://hdl.handle.net/1834/5388 |
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| Zamora, J.C.; Calonge, F.D.; Martín, M.P.. |
| A revision of the classification of Geastrum sect. Geastrum is presented on the basis of an integrative taxonomic approach, which involves the study of morphological, molecular, ecological, and chorological data. Four DNA regions are analysed: the ITS and LSU nrDNA, rpb1, and atp6. Phylogenetic reconstructions include 95 ingroup samples and show five main clades, which are considered as five subsections, one of them proposed as new (G. subsect. Hungarica), and a total of 27 lineages recognizable at species level. Discriminant function analyses, ANOVAs and Tukey’s HSD tests on more than 500 basidiomata reveal the utility of several quantitative morphological characters for species delimitation. As a result of the combination of the different sources of... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Chorology; Ecology; Geastraceae; Morphology; Phylogenetics; Species delimitation. |
| Ano: 2015 |
URL: http://www.repository.naturalis.nl/record/560059 |
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| Réblová, M.; Réblová, K.; Štěpánek, V.. |
| Thirteen morphologically similar strains of barbatosphaeria- and tectonidula-like fungi were studied based on the comparison of cultural and morphological features of sexual and asexual morphs and phylogenetic analyses of five nuclear loci, i.e. internal transcribed spacer rDNA operon (ITS), large and small subunit nuclear ribosomal DNA, β-tubulin, and second largest subunit of RNA polymerase II. Phylogenetic results were supported by in-depth comparative analyses of common core secondary structure of ITS1 and ITS2 in all strains and the identification of non-conserved, co-evolving nucleotides that maintain base pairing in the RNA transcript. Barbatosphaeria is defined as a well-supported monophyletic clade comprising several lineages and is placed in the... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Phylogenetics; Ramichloridium; Sequence analysis; Spacer regions; Sporothrix; Tectonidula. |
| Ano: 2015 |
URL: http://www.repository.naturalis.nl/record/588698 |
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| Nobre,Lydayanne Lilás de Melo; Santos,José Daniel Oliveira dos; Leite,Rychard; Almeida,Cícero. |
| Abstract The genus Spondias (family Anacardiaceae) comprises 19 taxa, ten of which occur in Neotropical regions. Spondias bahiensis has been suggested to be a hybrid, although initial evidence does not support this hypothesis. The aim of this study was to test the hypothesis of the hybrid origin of S. bahiensis using high-throughput sequencing with single nucleotide polymorphism (SNP) analysis, characterization of intragenomic nuclear ribosomal DNA (nrDNA), and nuclear and chloroplast phylogenomic analyses. The SNP analysis revealed a high number of SNPs in the S. bahiensis genome, and with respect to nrDNA, S. bahiensis shared approximately half of the SNP alleles with S. tuberosa, but not with S. mombin. Combining the SNP analysis with nrDNA phylogeny... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: RDNA; Phylogenetics; Evolution; Hybrid offspring. |
| Ano: 2018 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000500878 |
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| Arntzen, J.W.; García-París, M.. |
| Three competing phylogenetic hypotheses for the genus Alytes (midwife toads) are evaluated. Based on quantitative coding of protein characters the most parsimonious solution shows a sister taxon relationship for Alytes dickhilleni and A. muletensis. The alternatives in which A. obstetricans has its sister group in either A. dickhilleni or A. muletensis lack support. Using calibrations derived from protein evolutionary rates, the vicariant events giving rise to A. obstetricans and the lineage leading to the A. muletensis and A. dickhilleni clade and the subsequent splitting between A. muletensis and A. dickhilleni cannot be placed much earlier than the Miocene-Pliocene boundary. Biogeographical scenarios invoking an earlier time of divergence should be... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Allozymes; Alytes; Biogeography; Midwife toads; Phylogenetics; Spain; Taxonomy; Vicariance. |
| Ano: 1997 |
URL: http://www.repository.naturalis.nl/record/504096 |
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| Registros recuperados: 25 | |
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